Targeted sequencing of Aspalathus araneosa - SRA

SRX22405215: Targeted sequencing of Aspalathus araneosa
1 ILLUMINA (Illumina HiSeq 3000) run: 710,860 spots, 213.3M bases, 82Mb downloads

Design: Target capture using the "NitFix" panel of 100 loci

Submitted by: Mississippi State University

Study: Targeted sequencing in the Nitrogen-Fixing Clade Part 1

PRJNA1021556 • SRP470581 • All experiments • All runs

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Raw sequencing reads from herbarium specimens collected for the study "Shifts in evolutionary lability underlie independent gains and losses of root-nodule symbiosis in a single clade of plants." The method of data collection has been reported extensively in Folk et al. 2021: https://doi.org/10.1002/aps3.11410. Methods related to sequence assembly can be found in Kates et al. 2021 https://doi.org/10.3389/fpls.2021.669064.

Sample: Targeted sequencing of Aspalathus araneosa

SAMN37561935 • SRS19441893 • All experiments • All runs

Organism: Aspalathus araneosa

Library:

Name: 12b9b10e-349c-4078-8e17-b3f4ada13e18

Instrument: Illumina HiSeq 3000

Strategy: Targeted-Capture

Source: GENOMIC

Selection: Hybrid Selection

Layout: PAIRED

Runs: 1 run, 710,860 spots, 213.3M bases, 82Mb

Run	# of Spots	# of Bases	Size	Published
SRR26705364	710,860	213.3M	82Mb	2023-11-07

ID:: 30387683

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